Subunit and polysaccharide-conjugated vaccines

Subunit vaccines are a foundation of modern vaccinology. By containing only the essential components of a pathogen, such as purified proteins, polysaccharides, conjugates or outer-membrane vesicles (OMV), they offer a superior safety profile compared to whole-organism platforms.

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Your partner for subunit and polysaccharide-conjugated vaccines

These vaccines are widely used to prevent bacterial infections like Haemophilus influenzae type b, pneumococcal and meningococcal diseases, where polysaccharide-conjugated antigens play a central role. The complex formulations of thes vaccine types introduce analytical challenges, such as variable conjugation ratios, heterogeneous mixtures and difficult matrices containing often formulation adjuvants. That’s why advanced analytical strategies are essential to ensure product quality and consistency.

At Quality Assistance, we support your subunit vaccine development with dedicated analytical solutions. Whether you're working on protein-based vaccines, polysaccharide conjugates or multivalent formulations, our expert team helps you guarantee the identity, purity, potency, safety and integrity of your product, at every stage your development.

Analytical services for subunit vaccines

To support the development of your subunit vaccine, we implement a broad spectrum of specific analytical methodologies to guide your decision-making. Our services include:

PROTEIN / MODIFIED TOXIN / VIROSOME

Intact molecular weightMS (ESI-QTOF, MALDI-TOF) / SDS-PAGE / cGE
Peptide mappingUPLC (UV, QTOF) / MALDI-TOF
Immunological identificationELISA / ECL (MSD) / Western blotting / Luminex / SPR (Biacore) / BLI (Octet)
N- and C-terminal sequencingPeptide mapping (UPLC/QTOF) / MALDI-TOF (ISD)
IsoformsMS (ESI-QTOF, MALDI-TOF) / icIEF / (U)HPLC (IEX, RP, SEC, HIC) / 2D gel / Peptide mapping

Mass distribution profileMS (ESI-QTOF / MALDI-TOF)
Structural integrityCD / FT-IR
IsoformsicIEF / (U)HPLC (IEX, RP, SEC, HIC) / 2D gel / Peptide mapping / MS
Aggregation / Fragments / Particle size
distribution
SEC-(U)HPLC (UV, RI, MALS) / AF4 / cGE / DLS / SDS-PAGE / Imaging Particle Analysis
Glycosylation patternUPLC (FLUO, ESI-QTOF) / MALDI-TOF / CE (LIF) / GC (MS)
Disulphide bridgesPeptide mapping (UPLC-UV/MS) / cGE / SDS-PAGE
Free thiolsFluorescence (NPM) / UV (Ellman, DTNB)
Degradation patterns (including Met oxidation / Asn deamidation)IEX / RP-(U)HPLC / SE-(U)HPLC / SDS-PAGE / (U)HPLC (MS) / CE (icIEF, cGE) / 2D gel

Protein quantityBCA / Lowry / Bradford / UV / (U)HPLC (UV, Fluo)
Absolute protein content determinationICP-MS (S, isotope dilution)
Determination of extinction coefficientUV + ICP-MS (S, isotope dilution) / UV
Immunoassays / AntigenicityELISA / ECL (MSD) / Immunodiffusion (RID) / Luminex / SPR (Biacore) / BLI (Octet) / FACS

Phospholipid content and identity(U)HPLC (MS)
Size of virosomesDLS / SEC-(U)HPLC (UV/MALS) / AF4 / Imaging Particle Analysis

POLYSACCHARIDES

Immunological characterisationELISA / Luminex / ECL (MSD)

Biochemical markers (e.g. O-acetyl / Sialic acid)HPAEC (conductimetry) / Colometric assay / (U)HPLC (fluo)
Molecular size distributionSEC-(U)HPLC (RI, MALS) / AF4 (RI, MALS)
Residual protein contentBCA / Lowry / Bradford / UV / ELISA
Specific rotationOptical rotation
Counterion content (e.g. Na+, Ca2+)ICP (OES/MS) / HPAEC (conductimetry)

Polysaccharide contentColorimetric assay / (U)HPLC (Fluo, RI) / GC (FID, MS)

CONJUGATES

Immunological characterisationELISA / Luminex / MSD

Molecular size distributionSEC-(U)HPLC (RI, MALS) / AF4 (RI, MALS)
Free polysaccharide contentColorimetric assay / (U)HPLC (Fluo, RI) / GC (FID, MS) / ELISA
Free protein contentBCA / Lowry / Bradford / UV / ELISA

Polysaccharide contentBCA / Lowry / Bradford / UV / ELISA
Protein contentBCA / Lowry / Bradford / UV
Antigen / conjugale contentELISA / Luminex / ECL (MSD) / Elispot

We cover all major vaccine technologies

General vaccine testing services

Subunit vaccine development also demands a full complement of general testing. We ensure your product meets the highest standards of safety and efficacy through:

  • Full batch release testing (including sterility, endotoxin and pyrogenicity)
  • Method development, validation and transfer (adhering to cGMP guidelines)
  • Comprehensive stability studies (to define shelf-life and storage conditions)

Discover our general testing capabilities for vaccines

Related services

Cross-analytical services

The analytical expertise applied to subunit vaccines is also relevant to protein-based biotherapeutics. By bridging vaccine and therapeutic applications, we ensure consistent, compliant support across diverse development pipelines.

See the complete analytical services for protein-based therapeutics

Ready to move forward ?

Developing subunit vaccines, whether protein-based, polysaccharide or conjugates, requires integrated expertise in both protein and carbohydrate analytics. At Quality Assistance, we combine these capabilities on a single site ensuring clarity, compliance and confidence.

Need to prove your vaccine's Critical Quality Attributes (CQAs) to regulators? Talk to our experts today to build a tailored analytical strategy that drives your IND/BLA submission forward.

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